BLASTP 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: invertebrates_exponly.fa 22,595 sequences; 15,833,213 total letters Query= XP_028135169.1;heterogeneous_nuclear_ribonucleoprotein_M-like Length=536 Score E Sequences producing significant alignments: (Bits) Value Q9VHC7_DROME unnamed protein product 269 2e-82 >Q9VHC7_DROME unnamed protein product Length=632 Score = 269 bits (687), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 184/410 (45%), Positives = 237/410 (58%), Gaps = 84/410 (20%) Query 24 RDRSRDRGNASTTQRSTKPSQTRVFVSNIPYEYRWQDVKDIFRNEVGDVSFVELFYDESN 83 RDRSR+R N RV++SNIPY+YRWQD+KD+FR VG + +V+LF+DES Sbjct 48 RDRSRERRNC------------RVYISNIPYDYRWQDLKDLFRRIVGSIEYVQLFFDESG 95 Query 84 KSKGTGIVEFADKGSVDKCMEKMQRYEVNGRKLVVRDDSGVTRDRTGAIL---------- 133 K++G GIVEF D +V K +EKM RYEVNGR+LVV++D G RD+ G I+ Sbjct 96 KARGCGIVEFKDPENVQKALEKMNRYEVNGRELVVKEDHGEQRDQYGRIVRDGGGGGGGG 155 Query 134 --------------SGTSRRPPAERNFGGG-------GGGNSFNNSISFSSNNDGNWGNT 172 G R +R+ G G N+FN + + N+ + N Sbjct 156 GGVQGGNGGNNGGGGGGGRDHMDDRDRGFSRRDDDRLSGRNNFN--MMSNDYNNSSNYNL 213 Query 173 YGLSPQFLESLKIDPPLVNRVFIANLEYNVDEKKLRDAFKLAGRIVNIDLPLDKDGRIRG 232 YGLS FLESL I PL N+VF+ANL+Y VD KKL+ FKLAG++ ++DL LDK+G RG Sbjct 214 YGLSASFLESLGISGPLHNKVFVANLDYKVDNKKLKQVFKLAGKVQSVDLSLDKEGNSRG 273 Query 233 FAVIEYDHPVEAVQAISMFNHQSFFDRTLAVRMDRA---NDNIKLPEGLRSIGMGLGPNG 289 FAVIEYDHPVEAVQAISM + Q FDR + VR+DR N+ IKLPEGL +G+GLGPNG Sbjct 274 FAVIEYDHPVEAVQAISMLDRQMLFDRRMTVRLDRIPDKNEGIKLPEGLGGVGIGLGPNG 333 Query 290 EPLKCVAHNLNNQSNSSTNGLLG------------------AVPNNTLQQLSSLTGL--- 328 EPL+ VAHNL N S LLG AV N T L++LTG+ Sbjct 334 EPLRDVAHNLPN-GGQSQGQLLGNAQQGSQLGSVGSQPNSSAVSNATTNLLNNLTGVMFG 392 Query 329 -------SALNALQSANLGSLLG------NNLGSNDLSSLVSNSLGGGGG 365 S + +Q +LG+ G NNL + L+++V N LG GG Sbjct 393 NHAAVQPSPVAPVQKPSLGNNTGSGGLNLNNLNPSILAAVVGN-LGNQGG 441 Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Query= XP_028137283.1;zinc_finger_protein_236-like Length=611 ***** No hits found ***** Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Query= XP_028139326.1;uncharacterized_protein_LOC114333322 Length=198 ***** No hits found ***** Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Query= XP_028138335.1;uncharacterized_protein_LOC114332399 Length=210 ***** No hits found ***** Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Query= XP_028142428.1;uncharacterized_protein_LOC114335990_isoform_X1 Length=137 ***** No hits found ***** Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Query= XP_028140362.1;congested-like_trachea_protein Length=303 Score E Sequences producing significant alignments: (Bits) Value COLT_DROME unnamed protein product 259 7e-86 >COLT_DROME unnamed protein product Length=306 Score = 259 bits (663), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 128/284 (45%), Positives = 185/284 (65%), Gaps = 4/284 (1%) Query 5 NVAESFLCGGFGGICSVFVSHPTDTVKVRLQTMPVPKPGEPPLYSGILDCIKKSTKNEGI 64 N +SFL GGFGGIC+V HP DT+KVRLQTMP P PGE PLY G DC K+ KNEG+ Sbjct 14 NPVKSFLTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQPLYRGTFDCAAKTIKNEGV 73 Query 65 FFLYKGMTTPLLSVTPMTAVCFMGYALGNKIFGPADGSPLTNFQIYASGVFAGLCTGPVI 124 LYKGM+ PL V P+ A+CF GYALG ++ + + LT QI+ +G F+GL + ++ Sbjct 74 RGLYKGMSAPLTGVAPIFAMCFAGYALGKRLQQRGEDAKLTYPQIFVAGSFSGLFSTLIM 133 Query 125 TPGDRIKSILQVQKAH---KRHKGPLDCAVQLYKTGGIPSIFRGLTITTLRDATSTGVYF 181 PG+RIK +LQ Q+ +++ G +DCA +LYK GG+ S+F+G T LRD + G+YF Sbjct 134 APGERIKVLLQTQQGQGGERKYNGMIDCAGKLYKEGGLRSVFKGSCATMLRDLPANGLYF 193 Query 182 LSYDLIRRQFLNKQNTGW-DLLATMFSGGVAGATGYIIAMPADVIKSKIQASLDDQSRQG 240 L Y+ ++ +K TG +T+F+GGVAG +I+ MPADV+KS++Q++ + + G Sbjct 194 LVYEALQDVAKSKSETGQISTASTIFAGGVAGMAYWILGMPADVLKSRLQSAPEGTYKHG 253 Query 241 IRQTFKEVMATEGVAGLFKGGTLILLRAFLTCSVCFLCVTICKN 284 IR FK+++ +G L++G T I+LRAF + CF + + Sbjct 254 IRSVFKDLIVKDGPLALYRGVTPIMLRAFPANAACFFGIELANK 297 Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Query= XP_028141418.1;mitochondrial_carnitine/acylcarnitine_carrier_ protein-like Length=299 Score E Sequences producing significant alignments: (Bits) Value COLT_DROME unnamed protein product 243 3e-79 >COLT_DROME unnamed protein product Length=306 Score = 243 bits (619), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 119/285 (42%), Positives = 178/285 (62%), Gaps = 8/285 (3%) Query 7 LESFFCGGFGGICAVLVAHPLDTVKVRLQTMPVLKPGMPPLYLGLWHCIKKSTKDEGFFF 66 ++SF GGFGGIC VL HPLDT+KVRLQTMP PG PLY G + C K+ K+EG Sbjct 16 VKSFLTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQPLYRGTFDCAAKTIKNEGVRG 75 Query 67 VYKGMSAPLIAVTPLTAICFMSFEIGKKIFGPSDGSSLNNYQIFASGMFSGLCTAPLIAP 126 +YKGMSAPL V P+ A+CF + +GK++ + + L QIF +G FSGL + ++AP Sbjct 76 LYKGMSAPLTGVAPIFAMCFAGYALGKRLQQRGEDAKLTYPQIFVAGSFSGLFSTLIMAP 135 Query 127 GDRVKCLLQVQ------KSFSGPLDCVVQLYRKGGVSNLFRGLGATLIRDAPSTGVYFLT 180 G+R+K LLQ Q + ++G +DC +LY++GG+ ++F+G AT++RD P+ G+YFL Sbjct 136 GERIKVLLQTQQGQGGERKYNGMIDCAGKLYKEGGLRSVFKGSCATMLRDLPANGLYFLV 195 Query 181 YDLIRR--QLNKESPELDIIGTMCAGGFAAIFCWLLAMPIDVVKSKIQISLEEKHKQGVA 238 Y+ ++ + E+ ++ T+ AGG A + W+L MP DV+KS++Q + E +K G+ Sbjct 196 YEALQDVAKSKSETGQISTASTIFAGGVAGMAYWILGMPADVLKSRLQSAPEGTYKHGIR 255 Query 239 EVLKEILKTEGAFGFFRGGTLILTRAFLGGSICFLSFEFCKDCLN 283 V K+++ +G +RG T I+ RAF + CF E N Sbjct 256 SVFKDLIVKDGPLALYRGVTPIMLRAFPANAACFFGIELANKFFN 300 Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Query= XP_028143104.1;uncharacterized_protein_LOC114335990_isoform_X2 Length=136 ***** No hits found ***** Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Query= XP_028145505.1;uncharacterized_protein_LOC114338121_isoform_X2 Length=107 ***** No hits found ***** Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Query= XP_028144839.1;uncharacterized_protein_LOC114338121_isoform_X1 Length=151 ***** No hits found ***** Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Query= XP_028148534.1;general_transcription_factor_II-I_repeat_domain- containing_protein_2B-like Length=192 ***** No hits found ***** Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Query= XP_028127688.1;general_transcription_factor_II-I_repeat_domain- containing_protein_2A-like Length=176 ***** No hits found ***** Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Query= XP_028128741.1;uncharacterized_protein_LOC114324738 Length=150 ***** No hits found ***** Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Query= XP_028146525.1;uncharacterized_protein_LOC114339711 Length=148 ***** No hits found ***** Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Query= XP_028148206.1;POU_domain_protein_CF1A Length=405 Score E Sequences producing significant alignments: (Bits) Value CF1A_DROME unnamed protein product 465 3e-163 >CF1A_DROME unnamed protein product Length=427 Score = 465 bits (1196), Expect = 3e-163, Method: Compositional matrix adjust. Identities = 283/444 (64%), Positives = 306/444 (69%), Gaps = 56/444 (13%) Query 1 MAATTYLPASSAVTTDLEGNVVGMNIVAGYHSSASPRSAADANEMKYL-------PQHHH 53 MAAT+Y+ S DL+ + G GYH+S SPRSAADA EMKY+ Sbjct 1 MAATSYMTPPSG---DLDMALGG----GGYHTS-SPRSAADAGEMKYMQHHHHHHAAAAA 52 Query 54 NHHHHMASSPSPSGHTAVSLSANP-------WVSLQPGADPWTASMAGMHHPHH-----H 101 HH + SSPSP+G W +L P DPW + HH HH Sbjct 53 AAHHQLPSSPSPNGQGNGGGLGLGSGSGLGSWSALHP--DPWMQT----HHTHHLPAAAA 106 Query 102 HHQDVKPLTQSADMMHHQRQQQQSMGSPHA-WHGAVSSAHYNPGGAGSPLQQYHAAMNGM 160 + Q + Q + QQ M SPHA WH A + HY P G GSPLQ YH AMNGM Sbjct 107 VASAADTVKQEMSHLSQQTRIQQGMASPHAAWH-APHAGHYAPTG-GSPLQ-YHHAMNGM 163 Query 161 LAHH---------QAAPPLHHSLHRD---MQSPHHPQHSERD-VSGGEDETPTSDDLEAF 207 L H Q+ PLHH+L + + HH +RD +SGGE++TPTSDDLEAF Sbjct 164 LHHPAHAVAAAHHQSVAPLHHTLRGESPQLHIHHHMGGGDRDAISGGEEDTPTSDDLEAF 223 Query 208 AKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLE 267 AKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLE Sbjct 224 AKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLE 283 Query 268 EADSTTGSPTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQL 327 EADSTTGSPTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQL Sbjct 284 EADSTTGSPTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQL 343 Query 328 EKEVVRVWFCNRRQKEKRMTPPNTLGGDMMDGMPPGSHMHPSYGHHQDMHGSPMGQHSHS 387 EKEVVRVWFCNRRQKEKRMTPPNTLGGDMMDGMPPG H Y H DMHGSPMG HSHS Sbjct 344 EKEVVRVWFCNRRQKEKRMTPPNTLGGDMMDGMPPGHMHHGGYHPHHDMHGSPMGTHSHS 403 Query 388 HSPPMLSPQSM------GHQLTAH 405 HSPPMLSPQ+M HQL AH Sbjct 404 HSPPMLSPQNMQSSAVAAHQLAAH 427 Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Query= XP_028153038.1;charged_multivesicular_body_protein_1b Length=206 Score E Sequences producing significant alignments: (Bits) Value Q95SH2_DROME unnamed protein product 299 2e-104 >Q95SH2_DROME unnamed protein product Length=203 Score = 299 bits (766), Expect = 2e-104, Method: Compositional matrix adjust. Identities = 162/203 (80%), Positives = 180/203 (89%), Gaps = 1/203 (0%) Query 5 MSSTAMEKHLFNLKFAVKELERNSKRCEKEEKQEKAKTKQAIQKGNMEVARIHAENAIRQ 64 MS+++MEKHLFNLKFAVKELERNSK+CEKEEK EKAK K+AIQKGNM+VARIHAENAIRQ Sbjct 1 MSTSSMEKHLFNLKFAVKELERNSKKCEKEEKLEKAKAKKAIQKGNMDVARIHAENAIRQ 60 Query 65 KNQSVNYLRMSARVDAVASKIQSAVTTRKVTNSMAGVVKAMDVAMKSMNLEKISQVMDKF 124 KNQ+VNYLRMSARVDAVAS++QSA+TTRKVT SMAGVVKAMD AMK MNLEKIS +M+KF Sbjct 61 KNQAVNYLRMSARVDAVASRVQSALTTRKVTGSMAGVVKAMDAAMKGMNLEKISSLMEKF 120 Query 125 EQQFEDLGVQTDVLENTMGQTTTTLIPQNDVDSLMQQVADEAGLELNMELPEGPQSSAVS 184 E QFEDL VQ+ V+E TM T TT +PQ DVD+L+QQVADEAGLELNMELP G QS +V Sbjct 121 ESQFEDLDVQSSVMEGTMSDTVTTSVPQGDVDNLLQQVADEAGLELNMELPSGVQSQSVG 180 Query 185 TSTVV-HEQDELTQRLARLRQAE 206 ST V EQDELTQRLARLRQAE Sbjct 181 ASTAVSQEQDELTQRLARLRQAE 203 Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Query= XP_028149197.1;uncharacterized_protein_LOC114342259 Length=1601 ***** No hits found ***** Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Query= XP_028151467.1;zinc_finger_protein_ush_isoform_X3 Length=950 ***** No hits found ***** Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Query= XP_028152114.1;zinc_finger_protein_ush_isoform_X4 Length=922 ***** No hits found ***** Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Query= XP_028150168.1;zinc_finger_protein_ush_isoform_X1 Length=954 ***** No hits found ***** Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Query= XP_028150827.1;zinc_finger_protein_ush_isoform_X2 Length=953 ***** No hits found ***** Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Query= XP_028129810.1;Krueppel-like_factor_10 Length=578 ***** No hits found ***** Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Query= XP_028155564.1;DNA-directed_RNA_polymerase_II_subunit_RPB7 Length=173 Score E Sequences producing significant alignments: (Bits) Value Q9VFB5_DROME unnamed protein product 317 1e-112 >Q9VFB5_DROME unnamed protein product Length=173 Score = 317 bits (812), Expect = 1e-112, Method: Compositional matrix adjust. Identities = 151/173 (87%), Positives = 163/173 (94%), Gaps = 0/173 (0%) Query 1 MFYHISLEHEILLHPQYFGPQLLEKVKTKLYTEVEGTCTGKYGFVIAVTTIDSIGAGLIL 60 MFYHISLE EILLHP+YFGPQLLE VK KLY+EVEGTCTGKYGFVIAVTTID IG+G+I Sbjct 1 MFYHISLEQEILLHPRYFGPQLLETVKQKLYSEVEGTCTGKYGFVIAVTTIDQIGSGVIQ 60 Query 61 PGQGFVVYPVKYKAIVFRPFKGEVLDAVVRQVNKVGMFAEIGPLSCFISHHSIPAEMEFC 120 PGQGFVVYPVKYKAIVFRPFKGEVLDAVV+Q+NKVGMFAEIGPLSCFISHHSIPA+M+FC Sbjct 61 PGQGFVVYPVKYKAIVFRPFKGEVLDAVVKQINKVGMFAEIGPLSCFISHHSIPADMQFC 120 Query 121 PNVNPQCYKTKDEDVVIRAEGEIRLKIVGTRVDASGIFAIGTLMDDYLGLISN 173 PN NP CYK+KDEDVVI E +IRLKIVGTRVDA+GIFAIGTLMDDYLGL+SN Sbjct 121 PNGNPPCYKSKDEDVVISGEDKIRLKIVGTRVDATGIFAIGTLMDDYLGLVSN 173 Lambda K H 0.311 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5755270092 Database: invertebrates_exponly.fa Posted date: Aug 24, 2018 2:03 PM Number of letters in database: 15,833,213 Number of sequences in database: 22,595 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 21 Window for multiple hits: 40